STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pebAFerredoxin-dependent bilin reductase; Catalyzes the two-electron reduction of biliverdin IX-alpha at the C15 methine bridge; Belongs to the HY2 family. (280 aa)    
Predicted Functional Partners:
pebB
Ferredoxin-dependent bilin reductase; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family.
 
  
0.978
pcyA
Ferredoxin-dependent bilin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin; Belongs to the HY2 family.
     
0.941
ACC79397.1
PFAM: Haem oxygenase; KEGG: ava:Ava_3767 heme oxygenase.
    
 0.922
ACC82945.1
PFAM: Haem oxygenase; KEGG: ava:Ava_3827 heme oxygenase.
    
 0.914
cpcS-3
Conserved hypothetical protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.911
ACC82116.1
PFAM: oxidoreductase domain protein; KEGG: ava:Ava_0755 homoserine dehydrogenase, NAD-binding.
     
 0.903
ACC82191.1
PFAM: Phycobilisome protein; KEGG: sye:Syncc9902_1903 C-phycoerythrin class I beta chain.
 
   
 0.823
ACC82179.1
PFAM: Phycobilisome linker polypeptide; CpcD phycobilisome linker domain protein; KEGG: ter:Tery_4104 phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
   
 0.820
ACC82185.1
PFAM: PBS lyase HEAT domain protein repeat-containing protein; KEGG: ter:Tery_0990 PBS lyase heat-like repeat.
  
   
 0.820
ACC82190.1
PFAM: Phycobilisome protein; KEGG: syg:sync_0496 C-phycoerythrin class I alpha chain.
 
   
 0.813
Your Current Organism:
Nostoc punctiforme
NCBI taxonomy Id: 63737
Other names: N. punctiforme PCC 73102, Nostoc punctiforme ATCC 29133, Nostoc punctiforme PCC 73102, Nostoc sp. (strain ATCC 29133 / PCC 73102), Nostoc sp. ATCC 29133, Nostoc sp. PCC 73102
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