STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACC79598.1PFAM: transposase Tn3 family protein; KEGG: net:Neut_2533 transposase Tn3 family protein. (1014 aa)    
Predicted Functional Partners:
ACC79599.1
PFAM: phage integrase family protein; KEGG: dsy:DSY2171 hypothetical protein; Belongs to the 'phage' integrase family.
 
   
 0.609
ACC81802.1
PFAM: Resolvase, N-terminal domain; Resolvase helix-turn-helix domain protein; KEGG: rfe:RF_pd66 site-specific recombinases.
 
   
 0.510
ACC79597.1
PFAM: peptidase S8 and S53, subtilisin, kexin, sedolisin; KEGG: ana:alr0996 protease; Belongs to the peptidase S8 family.
       0.402
Your Current Organism:
Nostoc punctiforme
NCBI taxonomy Id: 63737
Other names: N. punctiforme PCC 73102, Nostoc punctiforme ATCC 29133, Nostoc punctiforme PCC 73102, Nostoc sp. (strain ATCC 29133 / PCC 73102), Nostoc sp. ATCC 29133, Nostoc sp. PCC 73102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.