node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SVI_2559 | SVI_3984 | SVI_2559 | SVI_3984 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.742 |
SVI_2559 | dbpA | SVI_2559 | SVI_0522 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.561 |
SVI_2559 | pnp | SVI_2559 | SVI_3284 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.469 |
SVI_2559 | rplC | SVI_2559 | SVI_4162 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.936 |
SVI_2559 | rplJ | SVI_2559 | SVI_4171 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.918 |
SVI_2559 | rplK | SVI_2559 | SVI_4173 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.883 |
SVI_2559 | rplM | SVI_2559 | SVI_0433 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.923 |
SVI_2559 | rplX | SVI_2559 | SVI_4151 | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.924 |
SVI_3984 | SVI_2559 | SVI_3984 | SVI_2559 | Hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.742 |
SVI_3984 | dbpA | SVI_3984 | SVI_0522 | Hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | 0.511 |
SVI_3984 | rplC | SVI_3984 | SVI_4162 | Hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.955 |
SVI_3984 | rplJ | SVI_3984 | SVI_4171 | Hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family. | 0.577 |
SVI_3984 | rplK | SVI_3984 | SVI_4173 | Hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.952 |
SVI_3984 | rplM | SVI_3984 | SVI_0433 | Hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.972 |
SVI_3984 | rplX | SVI_3984 | SVI_4151 | Hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit. | 0.947 |
SVI_3984 | rpsD | SVI_3984 | SVI_4138 | Hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.723 |
dbpA | SVI_2559 | SVI_0522 | SVI_2559 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | GTP-binding protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.561 |
dbpA | SVI_3984 | SVI_0522 | SVI_3984 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Hypothetical protein; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.511 |
dbpA | pnp | SVI_0522 | SVI_3284 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.678 |
dbpA | rne | SVI_0522 | SVI_2555 | ATP-dependent RNA helicase DbpA; Belongs to the DEAD box helicase family. | Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. | 0.546 |