Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SVI_0448 | SVI_0997 | SVI_0448 | SVI_0997 | Conserved hypothetical protein. | Peptidase, M28D family. | 0.472 |
SVI_0448 | SVI_1776 | SVI_0448 | SVI_1776 | Conserved hypothetical protein. | Peptidase, M28 family. | 0.474 |
SVI_0448 | SVI_2322 | SVI_0448 | SVI_2322 | Conserved hypothetical protein. | Zinc-dependent metallopeptidase. | 0.483 |
SVI_0448 | SVI_2970 | SVI_0448 | SVI_2970 | Conserved hypothetical protein. | TonB-dependent receptor. | 0.463 |
SVI_0448 | SVI_3084 | SVI_0448 | SVI_3084 | Conserved hypothetical protein. | TonB-dependent receptor. | 0.409 |
SVI_0448 | SVI_3599 | SVI_0448 | SVI_3599 | Conserved hypothetical protein. | Dipeptidyl peptidase IV. | 0.579 |
SVI_0997 | SVI_0448 | SVI_0997 | SVI_0448 | Peptidase, M28D family. | Conserved hypothetical protein. | 0.472 |
SVI_0997 | SVI_2322 | SVI_0997 | SVI_2322 | Peptidase, M28D family. | Zinc-dependent metallopeptidase. | 0.710 |
SVI_0997 | SVI_2970 | SVI_0997 | SVI_2970 | Peptidase, M28D family. | TonB-dependent receptor. | 0.645 |
SVI_0997 | SVI_3084 | SVI_0997 | SVI_3084 | Peptidase, M28D family. | TonB-dependent receptor. | 0.636 |
SVI_0997 | SVI_3599 | SVI_0997 | SVI_3599 | Peptidase, M28D family. | Dipeptidyl peptidase IV. | 0.628 |
SVI_1776 | SVI_0448 | SVI_1776 | SVI_0448 | Peptidase, M28 family. | Conserved hypothetical protein. | 0.474 |
SVI_1776 | SVI_2322 | SVI_1776 | SVI_2322 | Peptidase, M28 family. | Zinc-dependent metallopeptidase. | 0.515 |
SVI_1776 | SVI_2970 | SVI_1776 | SVI_2970 | Peptidase, M28 family. | TonB-dependent receptor. | 0.703 |
SVI_1776 | SVI_3084 | SVI_1776 | SVI_3084 | Peptidase, M28 family. | TonB-dependent receptor. | 0.704 |
SVI_1776 | SVI_3599 | SVI_1776 | SVI_3599 | Peptidase, M28 family. | Dipeptidyl peptidase IV. | 0.677 |
SVI_2321 | SVI_2322 | SVI_2321 | SVI_2322 | Transcriptional regulator, TetR family. | Zinc-dependent metallopeptidase. | 0.495 |
SVI_2322 | SVI_0448 | SVI_2322 | SVI_0448 | Zinc-dependent metallopeptidase. | Conserved hypothetical protein. | 0.483 |
SVI_2322 | SVI_0997 | SVI_2322 | SVI_0997 | Zinc-dependent metallopeptidase. | Peptidase, M28D family. | 0.710 |
SVI_2322 | SVI_1776 | SVI_2322 | SVI_1776 | Zinc-dependent metallopeptidase. | Peptidase, M28 family. | 0.515 |
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