Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SVI_2456 | SVI_2656 | SVI_2456 | SVI_2656 | Asparaginase family protein. | Aspartate racemase. | 0.900 |
SVI_2456 | SVI_3021 | SVI_2456 | SVI_3021 | Asparaginase family protein. | Glutamate decarboxylase, putative. | 0.838 |
SVI_2456 | ansA | SVI_2456 | SVI_2059 | Asparaginase family protein. | L-asparaginase I. | 0.915 |
SVI_2456 | argG | SVI_2456 | SVI_4015 | Asparaginase family protein. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.900 |
SVI_2456 | asnB | SVI_2456 | SVI_1775 | Asparaginase family protein. | Asparagine synthetase B, glutamine-hydrolyzing. | 0.915 |
SVI_2456 | aspA | SVI_2456 | SVI_2213 | Asparaginase family protein. | Aspartate ammonia-lyase. | 0.903 |
SVI_2456 | aspC-1 | SVI_2456 | SVI_2070 | Asparaginase family protein. | Aspartate aminotransferase. | 0.905 |
SVI_2456 | nadB | SVI_2456 | SVI_0931 | Asparaginase family protein. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.900 |
SVI_2456 | purA | SVI_2456 | SVI_0436 | Asparaginase family protein. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.906 |
SVI_2656 | SVI_2456 | SVI_2656 | SVI_2456 | Aspartate racemase. | Asparaginase family protein. | 0.900 |
SVI_2656 | SVI_3021 | SVI_2656 | SVI_3021 | Aspartate racemase. | Glutamate decarboxylase, putative. | 0.813 |
SVI_2656 | ansA | SVI_2656 | SVI_2059 | Aspartate racemase. | L-asparaginase I. | 0.915 |
SVI_2656 | argG | SVI_2656 | SVI_4015 | Aspartate racemase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.900 |
SVI_2656 | asnB | SVI_2656 | SVI_1775 | Aspartate racemase. | Asparagine synthetase B, glutamine-hydrolyzing. | 0.922 |
SVI_2656 | aspA | SVI_2656 | SVI_2213 | Aspartate racemase. | Aspartate ammonia-lyase. | 0.913 |
SVI_2656 | aspC-1 | SVI_2656 | SVI_2070 | Aspartate racemase. | Aspartate aminotransferase. | 0.900 |
SVI_2656 | nadB | SVI_2656 | SVI_0931 | Aspartate racemase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.901 |
SVI_2656 | purA | SVI_2656 | SVI_0436 | Aspartate racemase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
SVI_3021 | SVI_2456 | SVI_3021 | SVI_2456 | Glutamate decarboxylase, putative. | Asparaginase family protein. | 0.838 |
SVI_3021 | SVI_2656 | SVI_3021 | SVI_2656 | Glutamate decarboxylase, putative. | Aspartate racemase. | 0.813 |
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