Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SVI_1368 | SVI_3090 | SVI_1368 | SVI_3090 | nrfJ-related protein. | Hypothetical protein. | 0.428 |
SVI_1368 | SVI_3091 | SVI_1368 | SVI_3091 | nrfJ-related protein. | Hypothetical protein. | 0.428 |
SVI_1368 | SVI_3092 | SVI_1368 | SVI_3092 | nrfJ-related protein. | Hypothetical protein. | 0.428 |
SVI_1368 | copA | SVI_1368 | SVI_3093 | nrfJ-related protein. | Copper-transporting P-type ATPase. | 0.428 |
SVI_3090 | SVI_1368 | SVI_3090 | SVI_1368 | Hypothetical protein. | nrfJ-related protein. | 0.428 |
SVI_3090 | SVI_3091 | SVI_3090 | SVI_3091 | Hypothetical protein. | Hypothetical protein. | 0.635 |
SVI_3090 | SVI_3092 | SVI_3090 | SVI_3092 | Hypothetical protein. | Hypothetical protein. | 0.525 |
SVI_3090 | SVI_3233 | SVI_3090 | SVI_3233 | Hypothetical protein. | Hypothetical protein. | 0.825 |
SVI_3090 | copA | SVI_3090 | SVI_3093 | Hypothetical protein. | Copper-transporting P-type ATPase. | 0.439 |
SVI_3091 | SVI_1368 | SVI_3091 | SVI_1368 | Hypothetical protein. | nrfJ-related protein. | 0.428 |
SVI_3091 | SVI_3090 | SVI_3091 | SVI_3090 | Hypothetical protein. | Hypothetical protein. | 0.635 |
SVI_3091 | SVI_3092 | SVI_3091 | SVI_3092 | Hypothetical protein. | Hypothetical protein. | 0.635 |
SVI_3091 | SVI_3233 | SVI_3091 | SVI_3233 | Hypothetical protein. | Hypothetical protein. | 0.825 |
SVI_3091 | copA | SVI_3091 | SVI_3093 | Hypothetical protein. | Copper-transporting P-type ATPase. | 0.524 |
SVI_3092 | SVI_1368 | SVI_3092 | SVI_1368 | Hypothetical protein. | nrfJ-related protein. | 0.428 |
SVI_3092 | SVI_3090 | SVI_3092 | SVI_3090 | Hypothetical protein. | Hypothetical protein. | 0.525 |
SVI_3092 | SVI_3091 | SVI_3092 | SVI_3091 | Hypothetical protein. | Hypothetical protein. | 0.635 |
SVI_3092 | SVI_3094 | SVI_3092 | SVI_3094 | Hypothetical protein. | Hypothetical protein. | 0.418 |
SVI_3092 | SVI_3233 | SVI_3092 | SVI_3233 | Hypothetical protein. | Hypothetical protein. | 0.825 |
SVI_3092 | copA | SVI_3092 | SVI_3093 | Hypothetical protein. | Copper-transporting P-type ATPase. | 0.634 |
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