Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROD_02411 | ROD_02421 | ROD_02411 | ROD_02421 | Putative phage tail fibre assembly protein. | Similar to Mu protein S (tail fibre). | 0.945 |
ROD_02411 | ROD_25791 | ROD_02411 | ROD_25791 | Putative phage tail fibre assembly protein. | Putative phage tail fibre protein. | 0.770 |
ROD_02411 | ROD_38761 | ROD_02411 | ROD_38761 | Putative phage tail fibre assembly protein. | Putative adhesin autotransporter. | 0.639 |
ROD_02421 | ROD_02411 | ROD_02421 | ROD_02411 | Similar to Mu protein S (tail fibre). | Putative phage tail fibre assembly protein. | 0.945 |
ROD_02421 | ROD_38761 | ROD_02421 | ROD_38761 | Similar to Mu protein S (tail fibre). | Putative adhesin autotransporter. | 0.698 |
ROD_02421 | tfa | ROD_02421 | ROD_25781 | Similar to Mu protein S (tail fibre). | Putative phage tail fibre assembly protein. | 0.771 |
ROD_04151 | ROD_25701 | ROD_04151 | ROD_25701 | Putative outer membrane autotransporter. | Large repetitive protein; Probably secreted by adjacent type I secretion system. | 0.605 |
ROD_04151 | ROD_38761 | ROD_04151 | ROD_38761 | Putative outer membrane autotransporter. | Putative adhesin autotransporter. | 0.608 |
ROD_04151 | adcA | ROD_04151 | ROD_41301 | Putative outer membrane autotransporter. | Putative adhesin autotransporter. | 0.679 |
ROD_04151 | wzzB | ROD_04151 | ROD_21651 | Putative outer membrane autotransporter. | Chain length determinant protein. | 0.500 |
ROD_25701 | ROD_04151 | ROD_25701 | ROD_04151 | Large repetitive protein; Probably secreted by adjacent type I secretion system. | Putative outer membrane autotransporter. | 0.605 |
ROD_25701 | ROD_25791 | ROD_25701 | ROD_25791 | Large repetitive protein; Probably secreted by adjacent type I secretion system. | Putative phage tail fibre protein. | 0.500 |
ROD_25701 | ROD_35071 | ROD_25701 | ROD_35071 | Large repetitive protein; Probably secreted by adjacent type I secretion system. | ABC transporter ATP-binding/permease protein. | 0.849 |
ROD_25701 | ROD_35181 | ROD_25701 | ROD_35181 | Large repetitive protein; Probably secreted by adjacent type I secretion system. | Putative transcriptional regulator. | 0.761 |
ROD_25701 | ROD_38761 | ROD_25701 | ROD_38761 | Large repetitive protein; Probably secreted by adjacent type I secretion system. | Putative adhesin autotransporter. | 0.560 |
ROD_25701 | adcA | ROD_25701 | ROD_41301 | Large repetitive protein; Probably secreted by adjacent type I secretion system. | Putative adhesin autotransporter. | 0.786 |
ROD_25791 | ROD_02411 | ROD_25791 | ROD_02411 | Putative phage tail fibre protein. | Putative phage tail fibre assembly protein. | 0.770 |
ROD_25791 | ROD_25701 | ROD_25791 | ROD_25701 | Putative phage tail fibre protein. | Large repetitive protein; Probably secreted by adjacent type I secretion system. | 0.500 |
ROD_25791 | ROD_38761 | ROD_25791 | ROD_38761 | Putative phage tail fibre protein. | Putative adhesin autotransporter. | 0.675 |
ROD_25791 | tfa | ROD_25791 | ROD_25781 | Putative phage tail fibre protein. | Putative phage tail fibre assembly protein. | 0.946 |
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