STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsBD-ribose ABC transporter, substrate-binding protein. (296 aa)    
Predicted Functional Partners:
rbsC
Ribose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 0.996
rbsA
Ribose ABC transporter, ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.989
ROD_28441
Putative ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 0.976
rbsD
Putative ribose transport/metabolism protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.975
rbsA-2
Putative ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.944
ROD_28431
Putative ABC transporter periplasmic binding protein.
  
  
 
0.925
trg
Methyl-accepting chemotaxis protein III (ribose an galactose chemoreceptor protein).
    
 0.906
ROD_05831
Putative sugar ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.864
alsC
D-allose transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.862
araH
L-arabinose ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.857
Your Current Organism:
Citrobacter rodentium
NCBI taxonomy Id: 637910
Other names: C. rodentium ICC168, Citrobacter rodentium ICC168, Citrobacter rodentium str. ICC168, Citrobacter rodentium strain ICC168
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