Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ROD_08441 | ROD_27091 | ROD_08441 | ROD_27091 | Putative glutathione S-transferase. | Putative glutathione S-transferase. | 0.900 |
ROD_08441 | ROD_34491 | ROD_08441 | ROD_34491 | Putative glutathione S-transferase. | Putative glutathione S transferase; Belongs to the GST superfamily. | 0.915 |
ROD_08441 | btuE | ROD_08441 | ROD_13451 | Putative glutathione S-transferase. | Vitamin B12 transport periplasmic protein (putative glutathione peroxidase); Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | 0.923 |
ROD_08441 | ggt | ROD_08441 | ROD_43811 | Putative glutathione S-transferase. | Gamma-glutamyltranspeptidase. | 0.904 |
ROD_08441 | gor | ROD_08441 | ROD_42991 | Putative glutathione S-transferase. | Glutathione reductase. | 0.917 |
ROD_08441 | gshB | ROD_08441 | ROD_50391 | Putative glutathione S-transferase. | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | 0.948 |
ROD_08441 | gsp | ROD_08441 | ROD_35371 | Putative glutathione S-transferase. | Bifunctional glutathionylspermidine synthetase/amidase [includes glutathionylspermidine synthase; glutathionylspermidine amidase]. | 0.900 |
ROD_08441 | gst | ROD_08441 | ROD_14321 | Putative glutathione S-transferase. | Glutathione S-transferase. | 0.925 |
ROD_27091 | ROD_08441 | ROD_27091 | ROD_08441 | Putative glutathione S-transferase. | Putative glutathione S-transferase. | 0.900 |
ROD_27091 | ROD_34491 | ROD_27091 | ROD_34491 | Putative glutathione S-transferase. | Putative glutathione S transferase; Belongs to the GST superfamily. | 0.912 |
ROD_27091 | btuE | ROD_27091 | ROD_13451 | Putative glutathione S-transferase. | Vitamin B12 transport periplasmic protein (putative glutathione peroxidase); Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | 0.923 |
ROD_27091 | ggt | ROD_27091 | ROD_43811 | Putative glutathione S-transferase. | Gamma-glutamyltranspeptidase. | 0.904 |
ROD_27091 | gor | ROD_27091 | ROD_42991 | Putative glutathione S-transferase. | Glutathione reductase. | 0.922 |
ROD_27091 | gshB | ROD_27091 | ROD_50391 | Putative glutathione S-transferase. | Glutathione synthetase; Belongs to the prokaryotic GSH synthase family. | 0.940 |
ROD_27091 | gsp | ROD_27091 | ROD_35371 | Putative glutathione S-transferase. | Bifunctional glutathionylspermidine synthetase/amidase [includes glutathionylspermidine synthase; glutathionylspermidine amidase]. | 0.900 |
ROD_27091 | gst | ROD_27091 | ROD_14321 | Putative glutathione S-transferase. | Glutathione S-transferase. | 0.921 |
ROD_34491 | ROD_08441 | ROD_34491 | ROD_08441 | Putative glutathione S transferase; Belongs to the GST superfamily. | Putative glutathione S-transferase. | 0.915 |
ROD_34491 | ROD_27091 | ROD_34491 | ROD_27091 | Putative glutathione S transferase; Belongs to the GST superfamily. | Putative glutathione S-transferase. | 0.912 |
ROD_34491 | btuE | ROD_34491 | ROD_13451 | Putative glutathione S transferase; Belongs to the GST superfamily. | Vitamin B12 transport periplasmic protein (putative glutathione peroxidase); Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent. | 0.916 |
ROD_34491 | ggt | ROD_34491 | ROD_43811 | Putative glutathione S transferase; Belongs to the GST superfamily. | Gamma-glutamyltranspeptidase. | 0.904 |
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