STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpRGlycerol-3-phosphate regulon repressor. (252 aa)    
Predicted Functional Partners:
glpD
Aerobic glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
  
 0.640
glpG
Putative membrane protein; Rhomboid-type serine protease that catalyzes intramembrane proteolysis.
       0.534
ROD_25291
Putative acyl-CoA synthetase.
    
   0.514
fruA
Fructose-specific PTS system EIIBC component.
  
  
 0.510
pfkB
6-phosphofructokinase isozyme 2 (phosphofructokinase-2); Belongs to the carbohydrate kinase PfkB family.
 
  
 0.499
fruK
1-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.490
glpE
Thiosulfate sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.
       0.440
fryA
Multiphosphoryl transfer protein 1 [includes phosphoenolpyruvate-protein phosphotransferase; phosphocarrier protein Hp; fructose-like phosphotransferase enzyme IIA component]; Belongs to the PEP-utilizing enzyme family.
  
  
 0.410
ptsA
Multiphosphoryl transfer protein 2.
  
  
 0.410
Your Current Organism:
Citrobacter rodentium
NCBI taxonomy Id: 637910
Other names: C. rodentium ICC168, Citrobacter rodentium ICC168, Citrobacter rodentium str. ICC168, Citrobacter rodentium strain ICC168
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