STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BAI80725.1Conserved hypothetical protein; TC 2.A.88 Vitamin Uptake Transporter (VUT) Family. (173 aa)    
Predicted Functional Partners:
BAI80461.1
Cobalt/nickel ABC transporter, permease; TC 3.A.1. The ATP-binding Cassette (ABC) Superfamily.
 
 0.974
cbiO
Cobalt ABC transporter, ATP-binding protein; TC 3.A.1. The ATP-binding Cassette (ABC) Superfamily.
   
 
 0.901
cbiQ
Cobalt ABC transporter, permease; TC 3.A.1. The ATP-binding Cassette (ABC) Superfamily.
  
 
 0.817
BAI80727.1
Formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
     0.805
BAI80726.1
Patatin-like phospholipase family protein.
       0.784
nuoF
NADH dehydrogenase I, F subunit.
       0.773
BAI80729.1
Conserved hypothetical protein.
       0.773
BAI80730.1
Hypothetical protein.
       0.773
BAI80731.1
Biopolymer transport protein, ExbD/TolR family; TC 2.C.1 The TonB-ExbB-ExbD/TolA-TolQ-TolR (TonB) Family of Auxiliary Proteins for Energization of Oute.
       0.773
BAI80732.1
Biopolymer transport protein, ExbB/TolQ family; TC 2.C.1 The TonB-ExbB-ExbD/TolA-TolQ-TolR (TonB) Family of Auxiliary Proteins for Energization of Oute.
       0.773
Your Current Organism:
Deferribacter desulfuricans
NCBI taxonomy Id: 639282
Other names: D. desulfuricans SSM1, Deferribacter desulfuricans SSM1, Deferribacter desulfuricans str. SSM1, Deferribacter desulfuricans strain SSM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.