Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BAI81406.1 | BAI81407.1 | DEFDS_1955 | DEFDS_1956 | Conserved hypothetical protein. | Tetratricopeptide repeat protein. | 0.773 |
BAI81406.1 | BAI81409.1 | DEFDS_1955 | DEFDS_1958 | Conserved hypothetical protein. | Methyltransferase. | 0.816 |
BAI81406.1 | BAI81410.1 | DEFDS_1955 | DEFDS_1959 | Conserved hypothetical protein. | Hydroxypyruvate reductase. | 0.773 |
BAI81406.1 | BAI81411.1 | DEFDS_1955 | DEFDS_1960 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.762 |
BAI81406.1 | BAI81412.1 | DEFDS_1955 | DEFDS_1961 | Conserved hypothetical protein. | Peptidase, M48 family. | 0.765 |
BAI81406.1 | BAI81413.1 | DEFDS_1955 | DEFDS_1962 | Conserved hypothetical protein. | sigma-E factor negative regulatory protein RseC. | 0.762 |
BAI81406.1 | BAI81414.1 | DEFDS_1955 | DEFDS_1963 | Conserved hypothetical protein. | Multiple antibiotic transporter, MarC family; TC 9.B.10 The 6 TMS Putative MarC Transporter (MarC) Family. | 0.762 |
BAI81406.1 | ribF | DEFDS_1955 | DEFDS_1953 | Conserved hypothetical protein. | Riboflavin biosynthesis regulatory protein RibF; Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.822 |
BAI81406.1 | rimO | DEFDS_1955 | DEFDS_1954 | Conserved hypothetical protein. | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.836 |
BAI81406.1 | serS | DEFDS_1955 | DEFDS_1957 | Conserved hypothetical protein. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.816 |
BAI81407.1 | BAI81406.1 | DEFDS_1956 | DEFDS_1955 | Tetratricopeptide repeat protein. | Conserved hypothetical protein. | 0.773 |
BAI81407.1 | BAI81409.1 | DEFDS_1956 | DEFDS_1958 | Tetratricopeptide repeat protein. | Methyltransferase. | 0.778 |
BAI81407.1 | BAI81410.1 | DEFDS_1956 | DEFDS_1959 | Tetratricopeptide repeat protein. | Hydroxypyruvate reductase. | 0.813 |
BAI81407.1 | BAI81411.1 | DEFDS_1956 | DEFDS_1960 | Tetratricopeptide repeat protein. | Conserved hypothetical protein. | 0.769 |
BAI81407.1 | BAI81412.1 | DEFDS_1956 | DEFDS_1961 | Tetratricopeptide repeat protein. | Peptidase, M48 family. | 0.762 |
BAI81407.1 | BAI81413.1 | DEFDS_1956 | DEFDS_1962 | Tetratricopeptide repeat protein. | sigma-E factor negative regulatory protein RseC. | 0.762 |
BAI81407.1 | BAI81414.1 | DEFDS_1956 | DEFDS_1963 | Tetratricopeptide repeat protein. | Multiple antibiotic transporter, MarC family; TC 9.B.10 The 6 TMS Putative MarC Transporter (MarC) Family. | 0.762 |
BAI81407.1 | ribF | DEFDS_1956 | DEFDS_1953 | Tetratricopeptide repeat protein. | Riboflavin biosynthesis regulatory protein RibF; Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family. | 0.777 |
BAI81407.1 | rimO | DEFDS_1956 | DEFDS_1954 | Tetratricopeptide repeat protein. | MiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.773 |
BAI81407.1 | serS | DEFDS_1956 | DEFDS_1957 | Tetratricopeptide repeat protein. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.793 |
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