STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snov_0397KEGG: azc:AZC_0692 two-component response regulator; PFAM: ANTAR domain protein; response regulator receiver; SMART: response regulator receiver. (196 aa)    
Predicted Functional Partners:
Snov_0398
KEGG: azc:AZC_0691 putative nitrate transport protein.
 
  
 0.956
Snov_0403
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: azc:AZC_0682 putative nitrite reductase.
 
  
 0.832
Snov_0406
PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: xau:Xaut_2497 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.814
Snov_0399
KEGG: xau:Xaut_2504 nitrate-binding protein NrtA precursor, periplasmic.
 
  
 0.782
Snov_0401
TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; KEGG: azc:AZC_0684 nitrate transport ATP-binding subunits C and D protein; SMART: AAA ATPase.
 
   
 0.507
Snov_0394
PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: azc:AZC_1402 putative oxidoreductase.
       0.499
Snov_0395
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: azc:AZC_1401 putative oxidoreductase.
       0.499
Snov_0396
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: azc:AZC_1400 putative oxidoreductase.
       0.499
Snov_3415
KEGG: azc:AZC_4226 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter.
  
  
 0.486
Snov_4460
uroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
 
  
 0.466
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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