STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snov_3648PFAM: Enoyl-CoA hydratase/isomerase; KEGG: har:HEAR2723 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)    
Predicted Functional Partners:
Snov_3456
KEGG: azc:AZC_4664 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein.
 
 0.945
Snov_2737
KEGG: bja:bll0226 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.903
Snov_0482
KEGG: rpc:RPC_1050 acetyl-CoA C-acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.899
Snov_4081
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: xau:Xaut_0427 3-hydroxyacyl-CoA dehydrogenase.
 
 0.812
Snov_0081
Multi-sensor hybrid histidine kinase; KEGG: azc:AZC_3923 response regulator receiver; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver.
  
 
 0.810
Snov_0801
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: xau:Xaut_4712 acyl-CoA dehydrogenase domain-containing protein.
 
 0.802
Snov_3649
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: cti:RALTA_A1652 putative L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
 
 
 0.784
Snov_0962
KEGG: tgr:Tgr7_0082 Hpt sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver; Hpt domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; response regulator receiver.
  
 
 0.783
Snov_2604
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; MHYT domain protein; histidine kinase A domain protein; response regulator receiver; KEGG: mch:Mchl_0272 PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat-containing protein; response regulator receiver.
  
 
 0.783
Snov_1647
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: azc:AZC_1544 putative enoyl-CoA hydratase.
  
     0.736
Your Current Organism:
Starkeya novella
NCBI taxonomy Id: 639283
Other names: S. novella DSM 506, Starkeya novella DSM 506, Starkeya novella IAM 12100, Starkeya novella str. DSM 506, Starkeya novella strain DSM 506
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