STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_1926PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mab:MAB_4431 enoyl-CoA hydratase/isomerase family protein; Belongs to the enoyl-CoA hydratase/isomerase family. (271 aa)    
Predicted Functional Partners:
Srot_1910
KEGG: rha:RHA1_ro02121 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein.
 
 0.956
Srot_2523
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0759c putative dehydrogenase (3- hydroxybutyryl-CoA dehydrogenase FadB).
 
 0.853
Srot_0361
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mtb:TBMG_02806 NADPH dependent 2,4-dienoyl- CoA reductase FadH.
  
 0.848
Srot_1927
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_1717c sugar ABC transporter, permease protein.
       0.773
Srot_1928
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmi:MMAR_3618 sugar-transport integral membrane protein ABC transporter UspB.
       0.773
Srot_2160
KEGG: rop:ROP_52500 acetyl-CoA acyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.770
Srot_2540
PFAM: MaoC domain protein dehydratase; domain of unknown function DUF1729; Acyl transferase; Beta-ketoacyl synthase; KEGG: rha:RHA1_ro01426 fatty-acyl-CoA synthase.
  
 0.769
Srot_0479
KEGG: mva:Mvan_2338 lipid-transfer protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.714
Srot_0579
TIGRFAM: acetyl-CoA acetyltransferase; KEGG: rer:RER_38940 acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.711
Srot_2537
KEGG: gbr:Gbro_4504 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.711
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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