STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_2079PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nca:Noca_0288 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (256 aa)    
Predicted Functional Partners:
Srot_1910
KEGG: rha:RHA1_ro02121 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein.
 0.994
Srot_2523
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: mab:MAB_0759c putative dehydrogenase (3- hydroxybutyryl-CoA dehydrogenase FadB).
 0.961
Srot_2536
PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: svi:Svir_30240 short chain enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase.
 0.933
Srot_2824
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mjl:Mjls_4812 enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
  
0.930
Srot_0314
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa32360 enoyl-CoA hydratase.
  
 
 
0.929
Srot_2410
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: cai:Caci_4435 enoyl-CoA hydratase/isomerase.
  
  
 
0.927
Srot_2414
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mav:MAV_1091 putative acyl-CoA dehydrogenase.
   
 0.800
Srot_2758
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro03093 acyl-CoA dehydrogenase.
   
 0.800
Srot_1748
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rer:RER_23000 acyl-CoA dehydrogenase.
   
 0.793
Srot_1749
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: gbr:Gbro_3463 acyl-CoA dehydrogenase domain protein.
   
 0.793
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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