STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Srot_2916Sugar transporter; KEGG: sgr:SGR_1900 putative glucose transporter; TIGRFAM: sugar transporter; PFAM: General substrate transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (473 aa)    
Predicted Functional Partners:
Srot_2917
KEGG: sgr:SGR_801 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain.
  
  
 0.702
Srot_2914
PFAM: major facilitator superfamily MFS_1; KEGG: mkm:Mkms_4542 EmrB/QacA family drug resistance transporter.
       0.615
Srot_2915
Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
       0.615
Srot_2918
PFAM: Methyltransferase type 11; KEGG: mmi:MMAR_2358 hypothetical protein.
  
    0.501
Srot_1050
PFAM: major facilitator superfamily MFS_1; KEGG: mab:MAB_0771c major facilitator transporter.
  
     0.495
Your Current Organism:
Segniliparus rotundus
NCBI taxonomy Id: 640132
Other names: S. rotundus DSM 44985, Segniliparus rotundus ATCC BAA-972, Segniliparus rotundus CIP 108378, Segniliparus rotundus DSM 44985, Segniliparus rotundus JCM 13578, Segniliparus rotundus str. DSM 44985, Segniliparus rotundus strain DSM 44985
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