STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG15873.1PFAM: GCN5-related N-acetyltransferase; KEGG: bpy:Bphyt_2494 GCN5-related N-acetyltransferase. (154 aa)    
Predicted Functional Partners:
ADG16624.1
PFAM: copper resistance D domain protein; KEGG: bxe:Bxe_A0653 putative copper-resistance transporter, CopD.
  
     0.742
ADG15187.1
PFAM: transglutaminase domain protein; KEGG: bxe:Bxe_A2939 putative transmembrane protein.
 
     0.734
ADG19047.1
PFAM: initiator RepB protein; KEGG: bxe:Bxe_B3026 putative replication protein.
  
     0.728
ADG15594.1
PFAM: polysaccharide biosynthesis protein; KEGG: bpy:Bphyt_1969 polysaccharide biosynthesis protein.
 
   
 0.723
ADG15377.1
PFAM: polysaccharide biosynthesis protein; KEGG: bxe:Bxe_A2518 polysaccharide exporter, (PST) family.
 
   
 0.713
ADG14192.1
PFAM: transglutaminase domain protein; KEGG: bpy:Bphyt_0363 hypothetical protein.
 
     0.661
ADG14857.1
PFAM: GCN5-related N-acetyltransferase; KEGG: bxe:Bxe_A3426 putative acetyltransferase.
  
     0.653
ADG15777.1
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: bxe:Bxe_A1958 TPR repeat-containing protein.
  
   
 0.640
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
 0.636
ADG15347.1
Cytochrome c class I; KEGG: bcm:Bcenmc03_5154 extracellular solute-binding protein; PFAM: cytochrome c class I; SMART: extracellular solute-binding protein family 3.
  
    0.605
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
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