STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG20168.1PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bxe:Bxe_C1362 xylono-1,4-lactonase. (292 aa)    
Predicted Functional Partners:
ADG20167.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_C1363 D-xylose dehydrogenase.
 
 0.985
ADG20171.1
KEGG: bxe:Bxe_C1359 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.946
ADG16714.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_3408 short-chain dehydrogenase/reductase SDR.
 
  0.929
ADG18843.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_3408 short-chain dehydrogenase/reductase SDR.
 
  0.929
ADG17717.1
PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: bpy:Bphyt_4867 SMP-30/gluconolaconase/LRE domain protein.
  
  
 
0.917
ADG18568.1
KEGG: bpy:Bphyt_4283 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; Belongs to the IlvD/Edd family.
 
  
 0.917
ADG20166.1
PFAM: glycoside hydrolase family 3 domain protein; KEGG: esa:ESA_02100 hypothetical protein.
     
 0.599
ADG20169.1
KEGG: bvi:Bcep1808_5603 LacI family transcription regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI.
       0.496
ADG16720.1
2-dehydro-3-deoxygalactonokinase; KEGG: bxe:Bxe_A0543 2-keto-3-deoxygalactonate kinase; PFAM: 2-keto-3-deoxy-galactonokinase.
 
   
 0.427
ADG20172.1
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bxe:Bxe_C1358 hypothetical protein.
 
   
 0.415
Your Current Organism:
Paraburkholderia sp. CCGE1002
NCBI taxonomy Id: 640511
Other names: P. sp. CCGE1002
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