STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADN61658.1KEGG: bpy:Bphyt_4923 type VI secretion protein IcmF; TIGRFAM: type VI secretion protein IcmF; PFAM: ImcF domain protein; protein of unknown function DUF1215. (1304 aa)    
Predicted Functional Partners:
ADN61657.1
KEGG: bpy:Bphyt_4922 type VI secretion-associated protein, BMA_A0400 family; TIGRFAM: type VI secretion-associated protein, BMA_A0400 family; PFAM: Type VI secretion system-associated, BMAA0400.
 
  
 0.959
ADN61656.1
PFAM: OmpA/MotB domain protein; transport-associated; KEGG: bpy:Bphyt_4921 OmpA/MotB domain protein.
 
  
 0.936
ADN61659.1
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; KEGG: bpr:GBP346_A3797 D-alanyl-D-alanine carboxypeptidase family protein; manually curated; PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin.
 
   
 0.875
ADN61649.1
KEGG: bpy:Bphyt_4914 type VI secretion protein, EvpB/VC_A0108 family; TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877.
 
  
 0.849
ADN61644.1
KEGG: bpy:Bphyt_4909 type IV / VI secretion system protein, DotU family; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU.
 
 
 0.841
ADN61648.1
KEGG: bpy:Bphyt_4913 type VI secretion protein, VC_A0107 family; TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: Uncharacterised conserved protein UCP028301.
 
  
 0.818
ADN56517.1
KEGG: rme:Rmet_0621 hypothetical protein; TIGRFAM: type IV / VI secretion system protein, DotU family; PFAM: Type IV / VI secretion system, DotU.
 
 
 0.816
ADN61645.1
KEGG: bpy:Bphyt_4910 type VI secretion protein, VC_A0114 family; TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876.
 
  
 0.814
ADN61650.1
KEGG: bpy:Bphyt_4915 type VI secretion system effector, Hcp1 family; TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796.
 
  
 0.812
ADN61655.1
KEGG: bpy:Bphyt_4920 type VI secretion-associated protein, ImpA family; TIGRFAM: type VI secretion-associated protein, ImpA family; PFAM: ImpA domain protein.
 
  
 0.811
Your Current Organism:
Burkholderia sp. CCGE1003
NCBI taxonomy Id: 640512
Other names: B. sp. CCGE1003
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.