STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1EDI3_HELROUncharacterized protein. (769 aa)    
Predicted Functional Partners:
T1G7Z6_HELRO
Nuclear cap-binding protein subunit 2.
    
 0.804
T1FTY1_HELRO
MIF4G domain-containing protein.
   
 0.764
T1FXR4_HELRO
Suf domain-containing protein.
   
 0.727
T1G6U7_HELRO
RRM domain-containing protein.
   
 0.720
T1G9I7_HELRO
RRM domain-containing protein.
   
0.720
T1FM80_HELRO
Uncharacterized protein.
   
 0.719
T1FMY6_HELRO
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.718
T1FNY6_HELRO
Uncharacterized protein.
   
 0.718
T1EDM9_HELRO
Small nuclear ribonucleoprotein Sm D3.
   
 0.714
T1EHH7_HELRO
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.713
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.