STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1EFC4_HELROUncharacterized protein. (770 aa)    
Predicted Functional Partners:
T1EJG6_HELRO
RanBD1 domain-containing protein.
   
 
 0.811
T1FXX0_HELRO
RanBD1 domain-containing protein.
   
 
 0.811
T1FY23_HELRO
RanBD1 domain-containing protein.
   
 
 0.811
T1FN60_HELRO
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.796
T1EXD4_HELRO
Uncharacterized protein.
    
 0.731
T1FSE6_HELRO
Uncharacterized protein.
    
 0.731
T1G9Q9_HELRO
Importin N-terminal domain-containing protein.
   
 
 0.724
T1FSQ4_HELRO
Peptidase S59 domain-containing protein.
   
 
 0.636
T1G0A4_HELRO
Uncharacterized protein.
   
 
 0.629
T1FY89_HELRO
Importin N-terminal domain-containing protein.
   
 
 0.596
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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