STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1ET32_HELROWD_REPEATS_REGION domain-containing protein. (428 aa)    
Predicted Functional Partners:
T1EFX7_HELRO
PUA domain-containing protein.
    
 0.989
T1EES5_HELRO
H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.
    
 0.980
T1G3H6_HELRO
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.971
T1G7E0_HELRO
Uncharacterized protein.
    
 0.949
T1G0A8_HELRO
TruB_N domain-containing protein.
    
 0.930
T1EG40_HELRO
TruB_N domain-containing protein.
    
 0.848
T1FM32_HELRO
WD_REPEATS_REGION domain-containing protein.
 
      0.793
T1FHB2_HELRO
Uncharacterized protein.
   
 0.707
T1FNM2_HELRO
40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.
   
 0.699
T1G9F4_HELRO
Tyrosine--tRNA ligase.
      
 0.699
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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