STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1EYB8_HELROB box-type domain-containing protein. (1075 aa)    
Predicted Functional Partners:
T1FVF6_HELRO
Uncharacterized protein.
   
 0.607
T1EG94_HELRO
Ubiquitin-like domain-containing protein.
    
  0.592
T1G6F8_HELRO
Uncharacterized protein.
  
     0.491
T1FNR2_HELRO
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.475
T1G4V6_HELRO
AN1-type domain-containing protein.
    
 0.472
T1G0K8_HELRO
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.432
T1EIX9_HELRO
Ubiquitin-like domain-containing protein.
    
  0.425
T1G384_HELRO
Uncharacterized protein.
    
 0.406
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.