STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1F788_HELROPseudoU_synth_2 domain-containing protein. (599 aa)    
Predicted Functional Partners:
T1FXC4_HELRO
TRUD domain-containing protein.
    
 
 0.857
T1G0E9_HELRO
Uncharacterized protein.
  
 
 0.733
T1F3Q4_HELRO
Uncharacterized protein.
  
 
 0.728
T1FJI2_HELRO
SpoU_methylase domain-containing protein.
  
 
 0.722
T1G0A8_HELRO
TruB_N domain-containing protein.
  
 
 0.686
T1G6I8_HELRO
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 0.675
T1ELF5_HELRO
PseudoU_synth_1 domain-containing protein.
  
  
 0.655
T1ERY8_HELRO
Uncharacterized protein.
  
   0.644
T1G7X7_HELRO
Uncharacterized protein.
   
   0.643
T1G9S1_HELRO
tRNA pseudouridine synthase.
  
  
 0.633
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.