STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1FAP0_HELROPeptidase_M28 domain-containing protein. (826 aa)    
Predicted Functional Partners:
T1FMX6_HELRO
AAA domain-containing protein; Belongs to the AAA ATPase family.
     
 0.630
T1F504_HELRO
Ig-like domain-containing protein.
     
 0.591
T1FIS4_HELRO
Sortilin-Vps10 domain-containing protein.
     
 0.591
T1FWB1_HELRO
VPS10 domain-containing protein.
     
 0.591
T1FU82_HELRO
Uncharacterized protein.
   
 
 0.554
T1FQJ7_HELRO
RIC1 domain-containing protein.
      
 0.553
T1EP63_HELRO
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.544
T1FXD4_HELRO
Katanin p60 ATPase-containing subunit A-like 2; Severs microtubules in vitro in an ATP-dependent manner. This activity may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.544
T1ELV6_HELRO
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.522
T1G4E5_HELRO
V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system.
   
 
 0.520
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.