STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1FLA3_HELROCCHC-type domain-containing protein. (488 aa)    
Predicted Functional Partners:
T1EGK8_HELRO
Uncharacterized protein.
    
 0.718
T1FXH7_HELRO
Uncharacterized protein.
    
 0.480
T1G5Q8_HELRO
CRC domain-containing protein.
    
 0.474
T1EMC3_HELRO
WD_REPEATS_REGION domain-containing protein.
    
 0.473
T1EZY7_HELRO
DIRP domain-containing protein.
    
 0.464
T1FZD6_HELRO
dUTPase domain-containing protein.
    
 0.400
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.