STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1FYW4_HELROPIH1_CS domain-containing protein. (133 aa)    
Predicted Functional Partners:
T1FTM7_HELRO
Uncharacterized protein.
   
 0.703
T1FYF5_HELRO
Smg4_UPF3 domain-containing protein.
   
 0.703
T1G7Z6_HELRO
Nuclear cap-binding protein subunit 2.
   
 0.685
T1FTY1_HELRO
MIF4G domain-containing protein.
   
 
 0.640
T1EXX7_HELRO
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.638
T1G0A7_HELRO
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
    
 0.638
T1G925_HELRO
Uncharacterized protein.
   
 
 0.624
T1FT49_HELRO
TPR_REGION domain-containing protein.
   
 
 0.598
T1G795_HELRO
LRRcap domain-containing protein.
      
 0.564
T1FN24_HELRO
WD_REPEATS_REGION domain-containing protein.
      
 0.562
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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