STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T1G3J3_HELROProtein kinase domain-containing protein; Belongs to the protein kinase superfamily. (331 aa)    
Predicted Functional Partners:
T1F765_HELRO
Uncharacterized protein.
    
 0.902
T1EM50_HELRO
Uncharacterized protein.
    
 0.817
T1G6M1_HELRO
RIO domain-containing protein.
    
 0.808
T1EEH2_HELRO
Bms1-type G domain-containing protein.
    
 0.771
T1F8Q6_HELRO
KH type-2 domain-containing protein.
    
 0.694
T1EFI7_HELRO
Uncharacterized protein.
   
 0.678
T1FDM0_HELRO
NOB1_Zn_bind domain-containing protein.
    
 0.667
T1FTI8_HELRO
RNA-binding protein NOB1; May play a role in mRNA degradation. Belongs to the NOB1 family.
    
 0.667
T1FNP6_HELRO
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
    
 0.633
T1FV46_HELRO
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
    
  0.632
Your Current Organism:
Helobdella robusta
NCBI taxonomy Id: 6412
Other names: H. robusta
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