STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20035.1COGs: COG1842 Phage shock protein A (IM30) suppresses sigma54-dependent transcription; InterPro IPR007157; KEGG: gfo:GFO_2640 PspA/IM30 family protein; PFAM: PspA/IM30 family protein; SPTR: PspA/IM30 family protein; PFAM: PspA/IM30 family. (230 aa)    
Predicted Functional Partners:
ADR20033.1
Band 7 protein; COGs: COG2268 conserved hypothetical protein; InterPro IPR001107; KEGG: gfo:GFO_2638 hypothetical protein; PFAM: band 7 protein; SPTR: Band 7 protein.
 
  
 0.950
ADR20036.1
KEGG: gfo:GFO_2641 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.949
ADR20832.1
COGs: COG0642 Signal transduction histidine kinase; InterProIPR005467: IPR001789: IPR000014: IPR000700: IPR 008207: IPR001610: IPR003661: IPR003594: IPR013767: IPR004358; KEGG: chu:CHU_2784 multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold domain protein; Hpt domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; PAS domain containing protein; SPTR: Multi-sensor hybrid histid [...]
   
 
 0.906
ADR20034.1
KEGG: gfo:GFO_2639 membrane protein; SPTR: Putative uncharacterized protein.
 
     0.905
ADR20884.1
KEGG: sli:Slin_6388 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: PspC domain.
  
 
 0.856
ADR21328.1
Phage shock protein C, PspC; COGs: COG1983 Putative stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: sli:Slin_2743 phage shock protein C, PspC; PFAM: PspC domain protein; SPTR: Phage shock protein C, PspC; PFAM: PspC domain; Protein of unknown function (DUF2807).
  
 
 0.856
ADR22167.1
Phage shock protein C, PspC; COGs: COG1983 Putative stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: ote:Oter_2032 phage shock protein C, PspC; PFAM: PspC domain protein; SPTR: Phage shock protein C, PspC; PFAM: PspC domain.
  
 
 0.856
ADR20032.1
AAA ATPase; InterPro IPR003593; KEGG: gfo:GFO_2637 hypothetical protein; SMART: AAA ATPase; SPTR: ATPase involved in DNA repair; PFAM: ATPase family associated with various cellular activities (AAA); ATPase involved in DNA repair.
 
     0.830
ADR20037.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: gfo:GFO_2642 HTH_3 family transcriptional regulator protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
 
  
 0.785
ADR20406.1
PAS/PAC sensor hybrid histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014: IPR004358: IPR013655: IPR013767: IPR 003661: IPR003594: IPR001789: IPR001610: IPR005467: IPR000700; KEGG: zpr:ZPR_2293 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold domain protein; response regulator receiver; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein; PAC repeat- [...]
    
 
 0.681
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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