STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR20440.1KEGG: zpr:ZPR_2233 putative DNA-binding protein; SPTR: Putative DNA-binding protein. (89 aa)    
Predicted Functional Partners:
ADR20439.1
KEGG: fps:FP1538 hypothetical protein; SPTR: Putative uncharacterized protein.
 
  
 0.951
ADR20438.1
KEGG: chu:CHU_1184 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: AAA domain (dynein-related subfamily).
 
     0.906
ADR21200.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cat:CA2559_11843 putative transposase; PFAM: integrase family protein; SPTR: Phage integrase family protein; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
 
   
 0.782
ADR21203.1
KEGG: chu:CHU_1184 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: AFG1-like ATPase.
 
     0.781
ADR20443.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: zpr:ZPR_2218 putative transposase; PFAM: integrase family protein; SPTR: Putative transposase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
 
   
 0.780
ADR21396.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: gfo:GFO_0671 phage integrase family protein; PFAM: integrase family protein; SPTR: Phage integrase family protein; tmRNA as predicted by Rfam (RF00023), score 131.11; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
 
   
 0.773
ADR23479.1
Hypothetical protein; COGs: COG3378 ATPase; KEGG: pdi:BDI_2140 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Virulence-associated protein E.
 
     0.579
ADR23153.1
KEGG: fps:FP1547 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.562
ADR21225.1
KEGG: fps:FP1547 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.558
ADR20418.1
KEGG: fps:FP1547 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.555
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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