STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21471.1Peptidase M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: cat:CA2559_08546 probable aminopeptidase; PFAM: peptidase M28; SPTR: Probable aminopeptidase; PFAM: PA domain; Peptidase family M28. (494 aa)    
Predicted Functional Partners:
ADR21472.1
Bile acid:sodium symporter; COGs: COG0385 Na+-dependent transporter; InterPro IPR002657; KEGG: lic:LIC12384 sodium bile acid symporter family protein; PFAM: Bile acid:sodium symporter; SPTR: Sodium bile acid symporter family protein; PFAM: Sodium Bile acid symporter family; TIGRFAM: bile acid transporter.
  
 
  0.743
ADR21473.1
KEGG: ath:AT3G05130 hypothetical protein; SPTR: T12H1.9 protein.
       0.482
ADR21493.1
Peptidase S9B dipeptidylpeptidase IV domain protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469: IPR002470: IPR002471; KEGG: sli:Slin_4504 peptidase S9B dipeptidylpeptidase IV domain protein; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Dipeptidyl peptidase IV; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
  
    0.477
ADR22730.1
Hypothetical protein; InterPro IPR022269; KEGG: sli:Slin_3273 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: hypothetical protein; TIGRFAM: conserved hypothetical protein, HNE_0200 family.
  
     0.471
ADR20749.1
KEGG: sli:Slin_2427 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.413
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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