STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22065.1KEGG: rbi:RB2501_04790 hypothetical protein; SPTR: Putative uncharacterized protein. (93 aa)    
Predicted Functional Partners:
ADR22066.1
KEGG: rbi:RB2501_04775 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.786
ADR22067.1
KEGG: rbi:RB2501_04770 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.765
ADR22068.1
COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016: IPR006015; KEGG: zpr:ZPR_3406 universal stress protein; PFAM: UspA domain-containing protein; SPTR: Universal stress protein; PFAM: Universal stress protein family.
       0.758
ADR22064.1
NAD-dependent epimerase/dehydratase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: gfo:GFO_1336 nucleotide-diphosphate-sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: Nucleotide-diphosphate-sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family.
       0.623
ADR22070.1
InterPro IPR018649; KEGG: zpr:ZPR_3394 predicted membrane protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2078).
       0.592
ADR22069.1
COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: gfo:GFO_1335 nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; SPTR: Nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein P-II.
       0.570
ADR22063.1
Vitamin K epoxide reductase; InterPro IPR012932; KEGG: gfo:GFO_1337 hypothetical protein; PFAM: Vitamin K epoxide reductase; SPTR: Putative uncharacterized protein; PFAM: Vitamin K epoxide reductase family.
       0.530
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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