STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4R5Z6_KOMPGUbiquitin conjugating enzyme, involved in the ER-associated protein degradation pathway. (167 aa)    
Predicted Functional Partners:
C4R400_KOMPG
Uncharacterized protein.
    
 
 0.993
C4QW21_KOMPG
Protein involved in ER-associated protein degradation.
   
 
 0.991
C4QX41_KOMPG
Ubiquitin-conjugating enzyme involved in ER-associated protein degradation.
    
0.985
C4R706_KOMPG
Ubiquitin-protein ligase.
    
 
 0.970
C4R111_KOMPG
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
    
 
 0.960
C4R086_KOMPG
Uncharacterized protein.
    
   0.957
C4R5S2_KOMPG
Ubiquitin activating enzyme (E1), involved in ubiquitin-mediated protein degradation; Belongs to the ubiquitin-activating E1 family.
    
 0.923
C4R8V1_KOMPG
Ubiquitin.
    
 0.856
C4R4V2_KOMPG
Ubiquitin-protein ligase of the ER/nuclear envelope.
    
 
 0.777
C4QV59_KOMPG
Ubiquitin-like domain-containing protein.
    
 0.739
Your Current Organism:
Komagataella phaffii
NCBI taxonomy Id: 644223
Other names: K. phaffii GS115, Komagataella phaffii GS115
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