STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Deba_1156Hypothetical protein; KEGG: ppf:Pput_2024 outer membrane porin; SPTR: C0FB13 Putative uncharacterized protein. (278 aa)    
Predicted Functional Partners:
Deba_1155
Protein of unknown function DUF128; COGs: COG1693 conserved hypothetical protein; InterPro IPR013668:IPR002846:IPR000169; KEGG: sat:SYN_03243 putative cytoplasmic protein; PFAM: Protein of unknown function DUF128; Ribonuclease R winged-helix domain protein; SPTR: Q2LQG6 Hypothetical cytosolic protein; PFAM: Domain of unknown function DUF128; Ribonuclease R winged-helix domain.
       0.448
Your Current Organism:
Desulfarculus baarsii
NCBI taxonomy Id: 644282
Other names: D. baarsii DSM 2075, Desulfarculus baarsii 2st 14, Desulfarculus baarsii DSM 2075, Desulfarculus baarsii str. DSM 2075, Desulfarculus baarsii strain DSM 2075
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.