STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL46105.1PFAM: alpha-L-arabinofuranosidase B; KEGG: ami:Amir_1971 alpha-L-arabinofuranosidase B. (460 aa)    
Predicted Functional Partners:
ADL46224.1
Alpha-N-arabinofuranosidase; PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; KEGG: ami:Amir_3213 glycoside hydrolase family 43; SMART: cellulose binding type IV; Belongs to the glycosyl hydrolase 43 family.
 
 0.961
ADL45506.1
KEGG: carbohydrate binding family 6; PFAM: glycoside hydrolase family 43; Carbohydrate binding family 6; cellulose-binding family II; SMART: cellulose binding type IV; cellulose-binding family II; Belongs to the glycosyl hydrolase 43 family.
 
 0.959
ADL49132.1
KEGG: sna:Snas_0202 alpha-L-arabinofuranosidase domain-containing protein; PFAM: alpha-L-arabinofuranosidase domain protein; SMART: alpha-L-arabinofuranosidase domain protein.
 
  
 0.916
ADL46104.1
KEGG: scb:SCAB_3871 hypothetical protein; PFAM: protein of unknown function DUF1680; Ricin B lectin; SMART: Ricin B lectin.
 
     0.864
ADL47075.1
KEGG: kra:Krad_0587 glucuronate isomerase; PFAM: Glucuronate isomerase.
     
  0.800
araA
L-arabinose isomerase; Catalyzes the conversion of L-arabinose to L-ribulose.
     
  0.800
ADL47198.1
Ricin B lectin; KEGG: glycoside hydrolase family 43; PFAM: Ricin B lectin; glycoside hydrolase family 43; SMART: Ricin B lectin.
 
  
 0.704
ADL47149.1
Cellulose-binding family II; KEGG: ami:Amir_4199 ricin B lectin; PFAM: cellulose-binding family II; Pectate lyase/Amb allergen; SMART: cellulose-binding family II; Pectate lyase/Amb allergen; Parallel beta-helix repeat.
  
   
 0.683
ADL47337.1
KEGG: hau:Haur_1666 cellulose-binding family II protein; PFAM: cellulose-binding family II; SMART: cellulose-binding family II.
  
   
 0.665
ADL46225.1
Cellulose-binding family II; KEGG: ami:Amir_3303 glycoside hydrolase family 62; PFAM: cellulose-binding family II; SMART: cellulose-binding family II.
  
     0.643
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.