STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL49509.1Polysaccharide deacetylase; KEGG: sco:SCO2291 secreted acetylxylan esterase; PFAM: polysaccharide deacetylase; cellulose-binding family II; SMART: cellulose-binding family II. (355 aa)    
Predicted Functional Partners:
ADL47228.1
Endo-1,4-beta-xylanase; PFAM: glycoside hydrolase family 11; cellulose-binding family II; KEGG: xce:Xcel_0742 endo-1,4-beta-xylanase; SMART: cellulose-binding family II; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
 
    
0.894
ADL48350.1
PFAM: acyltransferase 3; KEGG: saq:Sare_3827 acyltransferase 3.
  
  
 0.458
ADL48730.1
PFAM: glycosyl transferase family 2; polysaccharide deacetylase; KEGG: kfl:Kfla_0731 polysaccharide deacetylase.
 
  
0.456
Your Current Organism:
Micromonospora aurantiaca
NCBI taxonomy Id: 644283
Other names: M. aurantiaca ATCC 27029, Micromonospora aurantiaca ATCC 27029, Micromonospora aurantiaca str. ATCC 27029, Micromonospora aurantiaca strain ATCC 27029
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