sync_0308 protein (Synechococcus sp. CC9311)

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Score

sync_0308

Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748. (1001 aa)

Predicted Functional Partners:

psbI

0.632

sync_0114

0.555

sync_1879

0.520

sync_2563

0.515

rpoA

0.450

sync_2133

0.427

sync_0306

0.409

Your Current Organism:

Synechococcus sp. CC9311

NCBI taxonomy Id: 64471
Other names: S. sp. CC9311

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
psbI	sync_0306	sync_0307	sync_0306	Photosystem II reaction center I protein; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.	Repeats containing protein.	0.615
psbI	sync_0308	sync_0307	sync_0308	Photosystem II reaction center I protein; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	0.632
rpoA	sync_0308	sync_0414	sync_0308	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	0.450
sync_0114	sync_0308	sync_0114	sync_0308	Bacterial extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547.	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	0.555
sync_0306	psbI	sync_0306	sync_0307	Repeats containing protein.	Photosystem II reaction center I protein; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.	0.615
sync_0306	sync_0308	sync_0306	sync_0308	Repeats containing protein.	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	0.409
sync_0308	psbI	sync_0308	sync_0307	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	Photosystem II reaction center I protein; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.	0.632
sync_0308	rpoA	sync_0308	sync_0414	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.450
sync_0308	sync_0114	sync_0308	sync_0114	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	Bacterial extracellular solute-binding protein, family 1; Identified by match to protein family HMM PF01547.	0.555
sync_0308	sync_0306	sync_0308	sync_0306	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	Repeats containing protein.	0.409
sync_0308	sync_1879	sync_0308	sync_1879	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	ROK family sugar kinase; Identified by match to protein family HMM PF00480.	0.520
sync_0308	sync_2133	sync_0308	sync_2133	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).	0.427
sync_0308	sync_2563	sync_0308	sync_2563	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	Possible beta-N-acetylglucosaminidase; Identified by match to protein family HMM PF00933.	0.515
sync_1879	sync_0308	sync_1879	sync_0308	ROK family sugar kinase; Identified by match to protein family HMM PF00480.	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	0.520
sync_1879	sync_2133	sync_1879	sync_2133	ROK family sugar kinase; Identified by match to protein family HMM PF00480.	N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).	0.510
sync_2133	sync_0308	sync_2133	sync_0308	N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	0.427
sync_2133	sync_1879	sync_2133	sync_1879	N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).	ROK family sugar kinase; Identified by match to protein family HMM PF00480.	0.510
sync_2563	sync_0308	sync_2563	sync_0308	Possible beta-N-acetylglucosaminidase; Identified by match to protein family HMM PF00933.	Glycoside hydrolase family 38; Identified by match to protein family HMM PF01074; match to protein family HMM PF07748.	0.515