STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_0329Conserved hypothetical protein. (419 aa)    
Predicted Functional Partners:
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.789
sync_0326
BadF/BadG/BcrA/BcrD ATPase family superfamily; Identified by match to protein family HMM PF01869.
       0.784
sync_0327
Putative inorganic carbon transporter/0-antigen polymerase (ICT/OAP) family protein; Identified by match to protein family HMM PF04932.
       0.784
sync_0330
Conserved hypothetical protein.
       0.574
sync_0331
Conserved hypothetical protein.
       0.554
sync_0386
Conserved hypothetical protein.
  
     0.462
sync_1990
Conserved hypothetical protein; Catalyzes the decarbonylation of fatty aldehydes to alkanes.
  
     0.415
sync_2585
Putative membrane protein.
  
     0.408
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.