STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sync_2192Metallo-beta-lactamase superfamily hydrolase. (217 aa)    
Predicted Functional Partners:
sync_0156
Polyketide synthase, putative; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02801; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
  
 
 0.876
sync_1287
Conserved hypothetical protein.
  
   
 0.787
sync_0291
Conserved hypothetical protein.
  
     0.766
sync_0444
Conserved hypothetical protein.
  
     0.762
sync_0351
Conserved hypothetical protein; Identified by similarity to GB:CAE06815.1.
  
     0.757
sync_1332
Conserved hypothetical protein.
  
   
 0.733
sync_1900
Conserved hypothetical protein.
  
     0.724
sync_0642
Conserved hypothetical protein.
  
     0.723
sync_2161
Conserved hypothetical protein.
  
     0.720
sync_0563
Uncharacterized protein.
  
     0.719
Your Current Organism:
Synechococcus sp. CC9311
NCBI taxonomy Id: 64471
Other names: S. sp. CC9311
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.