Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACR17387.1 | ACR17388.1 | ckrop_0624 | ckrop_0625 | Putative GTP-binding protein. | Putative secreted protein. | 0.757 |
ACR17387.1 | ACR17390.1 | ckrop_0624 | ckrop_0627 | Putative GTP-binding protein. | Putative membrane protein. | 0.622 |
ACR17387.1 | ACR17391.1 | ckrop_0624 | ckrop_0628 | Putative GTP-binding protein. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.507 |
ACR17387.1 | mshB | ckrop_0624 | ckrop_0626 | Putative GTP-binding protein. | MshB deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.634 |
ACR17388.1 | ACR17387.1 | ckrop_0625 | ckrop_0624 | Putative secreted protein. | Putative GTP-binding protein. | 0.757 |
ACR17388.1 | ACR17390.1 | ckrop_0625 | ckrop_0627 | Putative secreted protein. | Putative membrane protein. | 0.782 |
ACR17388.1 | ACR17391.1 | ckrop_0625 | ckrop_0628 | Putative secreted protein. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.579 |
ACR17388.1 | mshB | ckrop_0625 | ckrop_0626 | Putative secreted protein. | MshB deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.832 |
ACR17390.1 | ACR17387.1 | ckrop_0627 | ckrop_0624 | Putative membrane protein. | Putative GTP-binding protein. | 0.622 |
ACR17390.1 | ACR17388.1 | ckrop_0627 | ckrop_0625 | Putative membrane protein. | Putative secreted protein. | 0.782 |
ACR17390.1 | ACR17391.1 | ckrop_0627 | ckrop_0628 | Putative membrane protein. | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | 0.606 |
ACR17390.1 | mshB | ckrop_0627 | ckrop_0626 | Putative membrane protein. | MshB deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.820 |
ACR17391.1 | ACR17387.1 | ckrop_0628 | ckrop_0624 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Putative GTP-binding protein. | 0.507 |
ACR17391.1 | ACR17388.1 | ckrop_0628 | ckrop_0625 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Putative secreted protein. | 0.579 |
ACR17391.1 | ACR17390.1 | ckrop_0628 | ckrop_0627 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | Putative membrane protein. | 0.606 |
ACR17391.1 | mshB | ckrop_0628 | ckrop_0626 | Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. | MshB deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.596 |
ACR18117.1 | ACR18267.1 | ckrop_1377 | ckrop_1538 | Hypothetical protein. | Hypothetical protein. | 0.752 |
ACR18117.1 | mshA | ckrop_1377 | ckrop_1927 | Hypothetical protein. | MshA glycosyltransferase; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.602 |
ACR18117.1 | mshB | ckrop_1377 | ckrop_0626 | Hypothetical protein. | MshB deacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.715 |
ACR18117.1 | mshC | ckrop_1377 | ckrop_0920 | Hypothetical protein. | MshC ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.425 |
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