node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACR18102.1 | ACR18213.1 | ckrop_1361 | ckrop_1483 | Ribonuclease E. | Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 0.715 |
ACR18102.1 | ACR18800.1 | ckrop_1361 | ckrop_2103 | Ribonuclease E. | tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | 0.510 |
ACR18102.1 | deaD | ckrop_1361 | ckrop_1310 | Ribonuclease E. | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 0.715 |
ACR18102.1 | infB | ckrop_1361 | ckrop_1142 | Ribonuclease E. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.408 |
ACR18102.1 | pnp | ckrop_1361 | ckrop_1133 | Ribonuclease E. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.951 |
ACR18102.1 | rho | ckrop_1361 | ckrop_1286 | Ribonuclease E. | Transcription termination factor; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.434 |
ACR18102.1 | rnj | ckrop_1361 | ckrop_1123 | Ribonuclease E. | Conserved hypothetical protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay. | 0.635 |
ACR18213.1 | ACR18102.1 | ckrop_1483 | ckrop_1361 | Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Ribonuclease E. | 0.715 |
ACR18213.1 | infB | ckrop_1483 | ckrop_1142 | Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.417 |
ACR18213.1 | pnp | ckrop_1483 | ckrop_1133 | Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.863 |
ACR18213.1 | rpoB | ckrop_1483 | ckrop_1858 | Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.509 |
ACR18213.1 | rpsO | ckrop_1483 | ckrop_1135 | Putative ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.608 |
ACR18800.1 | ACR18102.1 | ckrop_2103 | ckrop_1361 | tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Ribonuclease E. | 0.510 |
ACR18800.1 | pnp | ckrop_2103 | ckrop_1133 | tRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.811 |
deaD | ACR18102.1 | ckrop_1310 | ckrop_1361 | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | Ribonuclease E. | 0.715 |
deaD | infB | ckrop_1310 | ckrop_1142 | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.417 |
deaD | pnp | ckrop_1310 | ckrop_1133 | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.863 |
deaD | rpoB | ckrop_1310 | ckrop_1858 | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | DNA-directed RNA polymerase, beta chain; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.509 |
deaD | rpsO | ckrop_1310 | ckrop_1135 | ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. | 30S ribosomal protein S15; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it helps nucleate assembly of the platform of the 30S subunit by binding and bridging several RNA helices of the 16S rRNA. | 0.553 |
infB | ACR18102.1 | ckrop_1142 | ckrop_1361 | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | Ribonuclease E. | 0.408 |