Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACR16909.1 | ACR18422.1 | ckrop_0112 | ckrop_1700 | Putative pyruvate kinase-like protein. | Putative lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.951 |
ACR16909.1 | aceE | ckrop_0112 | ckrop_0674 | Putative pyruvate kinase-like protein. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.922 |
ACR16909.1 | ldh | ckrop_0112 | ckrop_0111 | Putative pyruvate kinase-like protein. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.986 |
ACR16909.1 | lldD | ckrop_0112 | ckrop_0013 | Putative pyruvate kinase-like protein. | L-lactate dehydrogenase. | 0.919 |
ACR16909.1 | mez | ckrop_0112 | ckrop_0541 | Putative pyruvate kinase-like protein. | Malate oxidoreductase. | 0.942 |
ACR16909.1 | pgi | ckrop_0112 | ckrop_0469 | Putative pyruvate kinase-like protein. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.948 |
ACR16909.1 | pqo | ckrop_0112 | ckrop_0693 | Putative pyruvate kinase-like protein. | Pyruvate:quinone oxidoreductase; Belongs to the TPP enzyme family. | 0.912 |
ACR16909.1 | pyc | ckrop_0112 | ckrop_0286 | Putative pyruvate kinase-like protein. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.947 |
ACR16909.1 | pyk | ckrop_0112 | ckrop_0799 | Putative pyruvate kinase-like protein. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.928 |
ACR17080.1 | ACR18422.1 | ckrop_0297 | ckrop_1700 | Thiosulfate sulfurtransferase. | Putative lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | 0.904 |
ACR17080.1 | ldh | ckrop_0297 | ckrop_0111 | Thiosulfate sulfurtransferase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.904 |
ACR18422.1 | ACR16909.1 | ckrop_1700 | ckrop_0112 | Putative lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Putative pyruvate kinase-like protein. | 0.951 |
ACR18422.1 | ACR17080.1 | ckrop_1700 | ckrop_0297 | Putative lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Thiosulfate sulfurtransferase. | 0.904 |
ACR18422.1 | aceE | ckrop_1700 | ckrop_0674 | Putative lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Pyruvate dehydrogenase E1 component; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). | 0.923 |
ACR18422.1 | ldh | ckrop_1700 | ckrop_0111 | Putative lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.922 |
ACR18422.1 | lldD | ckrop_1700 | ckrop_0013 | Putative lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | L-lactate dehydrogenase. | 0.905 |
ACR18422.1 | mez | ckrop_1700 | ckrop_0541 | Putative lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Malate oxidoreductase. | 0.927 |
ACR18422.1 | pgi | ckrop_1700 | ckrop_0469 | Putative lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.908 |
ACR18422.1 | pqo | ckrop_1700 | ckrop_0693 | Putative lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Pyruvate:quinone oxidoreductase; Belongs to the TPP enzyme family. | 0.914 |
ACR18422.1 | pyc | ckrop_1700 | ckrop_0286 | Putative lactate dehydrogenase; Belongs to the LDH/MDH superfamily. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.925 |
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