Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ACR17450.1 | ACR17456.1 | ckrop_0689 | ckrop_0695 | Glutamine synthetase. | Glutamine synthetase. | 0.922 |
ACR17450.1 | carB | ckrop_0689 | ckrop_0990 | Glutamine synthetase. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.914 |
ACR17450.1 | glmS | ckrop_0689 | ckrop_1743 | Glutamine synthetase. | Glucosamine--fructose-6- phosphateaminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.936 |
ACR17450.1 | gltB | ckrop_0689 | ckrop_0050 | Glutamine synthetase. | Glutamate synthase large chain. | 0.985 |
ACR17450.1 | purF | ckrop_0689 | ckrop_0384 | Glutamine synthetase. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.911 |
ACR17456.1 | ACR17450.1 | ckrop_0695 | ckrop_0689 | Glutamine synthetase. | Glutamine synthetase. | 0.922 |
ACR17456.1 | carB | ckrop_0695 | ckrop_0990 | Glutamine synthetase. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.914 |
ACR17456.1 | glmS | ckrop_0695 | ckrop_1743 | Glutamine synthetase. | Glucosamine--fructose-6- phosphateaminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.924 |
ACR17456.1 | gltB | ckrop_0695 | ckrop_0050 | Glutamine synthetase. | Glutamate synthase large chain. | 0.985 |
ACR17456.1 | purF | ckrop_0695 | ckrop_0384 | Glutamine synthetase. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.911 |
carB | ACR17450.1 | ckrop_0990 | ckrop_0689 | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | Glutamine synthetase. | 0.914 |
carB | ACR17456.1 | ckrop_0990 | ckrop_0695 | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | Glutamine synthetase. | 0.914 |
carB | glmS | ckrop_0990 | ckrop_1743 | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | Glucosamine--fructose-6- phosphateaminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | 0.931 |
carB | gltB | ckrop_0990 | ckrop_0050 | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | Glutamate synthase large chain. | 0.986 |
carB | purF | ckrop_0990 | ckrop_0384 | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.967 |
glmS | ACR17450.1 | ckrop_1743 | ckrop_0689 | Glucosamine--fructose-6- phosphateaminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamine synthetase. | 0.936 |
glmS | ACR17456.1 | ckrop_1743 | ckrop_0695 | Glucosamine--fructose-6- phosphateaminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamine synthetase. | 0.924 |
glmS | carB | ckrop_1743 | ckrop_0990 | Glucosamine--fructose-6- phosphateaminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Carbamoyl-phosphate synthase large chain; Belongs to the CarB family. | 0.931 |
glmS | glmU | ckrop_1743 | ckrop_0546 | Glucosamine--fructose-6- phosphateaminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. | 0.941 |
glmS | gltB | ckrop_1743 | ckrop_0050 | Glucosamine--fructose-6- phosphateaminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source. | Glutamate synthase large chain. | 0.972 |
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