STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2G7Z3Ribosomal protein L31e-domain-containing protein. (120 aa)    
Predicted Functional Partners:
A0A1Y2H513
60S ribosomal protein L21-A.
  
 0.996
A0A1Y2G9N8
Ribosomal protein L24.
   
 0.995
A0A1Y2GF03
Ribosomal L39 protein-domain-containing protein.
   
 0.995
A0A1Y2GGU0
Ribosomal protein L35A.
   
 0.995
A0A1Y2GL43
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.995
A0A1Y2GQV3
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.995
A0A1Y2GZH2
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.995
A0A1Y2H6T0
60S ribosomal protein L5-2.
   
 0.995
A0A1Y2G5A6
60S ribosomal protein L17/L23; Belongs to the universal ribosomal protein uL14 family.
   
 0.994
A0A1Y2G6Z5
Putative 60S ribosomal protein L22.
   
 0.994
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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