STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GAI3C2 domain-containing protein. (188 aa)    
Predicted Functional Partners:
A0A1Y2GLG5
Glycerophosphoryl diester phosphodiesterase family-domain-containing protein.
   
 0.704
A0A1Y2GD15
Uncharacterized protein.
   
  0.703
A0A1Y2H0B4
Putative intracellular protein transport-related protein; Belongs to the adaptor complexes medium subunit family.
    
 0.675
A0A1Y2GC65
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.659
A0A1Y2GBJ9
Uncharacterized protein.
    
 0.650
A0A1Y2GNT5
DUF1681 domain-containing protein.
     
 0.584
A0A1Y2GUX0
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
 0.566
A0A1Y2GVG4
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.543
A0A1Y2GG29
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
    
  0.512
A0A1Y2GP89
Stretch-activated Ca2+-permeable channel component-domain-containing protein.
    
  0.512
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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