STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GDS8BHLH domain-containing protein. (115 aa)    
Predicted Functional Partners:
A0A1Y2GCI6
BHLH domain-containing protein.
    
0.884
A0A1Y2GCK5
BHLH domain-containing protein.
    
 0.884
A0A1Y2GKB2
BHLH domain-containing protein.
    
 0.884
A0A1Y2GQU9
BHLH domain-containing protein.
    
 0.849
A0A1Y2GIG5
Glycosyl transferase family 41-domain-containing protein.
    
  0.753
A0A1Y2G7T3
Importin subunit beta-3.
    
   0.588
A0A1Y2GZJ8
Importin subunit beta-3.
    
   0.588
A0A1Y2GME6
Citrate synthase-like protein.
     
 0.578
A0A1Y2GY21
Putative ATP-citrate synthase subunit 1 (ATP-citrate (Pro-S-)-lyase 1).
     
 0.578
A0A1Y2G551
14-3-3 protein; Belongs to the 14-3-3 family.
    
   0.524
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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