STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GEY8Uncharacterized protein. (644 aa)    
Predicted Functional Partners:
A0A1Y2GWL4
Uncharacterized protein.
    
   0.864
A0A1Y2H2M6
Synaptobrevin.
     
 0.596
A0A1Y2GYI2
Developmentally-regulated GTP-binding protein 1.
    
   0.548
A0A1Y2GGS1
DNA polymerase alpha/epsilon subunit B-domain-containing protein.
    
   0.508
A0A1Y2GWL2
P-loop containing nucleoside triphosphate hydrolase protein.
    
  0.483
A0A1Y2GXB4
Secretory pathway protein Sec18.
    
  0.456
A0A1Y2GUQ7
P-loop containing nucleoside triphosphate hydrolase protein.
    
   0.437
A0A1Y2GSM3
Citrate synthase; Belongs to the citrate synthase family.
    
   0.403
A0A1Y2H295
Citrate synthase; Belongs to the citrate synthase family.
    
   0.403
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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