STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GJ60Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (72 aa)    
Predicted Functional Partners:
A0A1Y2GMP3
Ubiquitin-conjugating enzyme/RWD-like protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.952
A0A1Y2G8W8
RING-box protein 1.
    
 0.944
A0A1Y2H428
Cullin; Belongs to the cullin family.
   
 0.940
A0A1Y2GH41
Cullin-domain-containing protein; Belongs to the cullin family.
   
 0.937
A0A1Y2GF59
Ubiquitin-like protein.
    
 0.911
A0A1Y2GGG0
Cullin; Belongs to the cullin family.
   
 0.868
A0A1Y2GKR7
Ubiquitin-protein ligase, cullin 4; Belongs to the cullin family.
    
 0.863
A0A1Y2GAI7
Armadillo-type protein.
    
 0.841
A0A1Y2GVJ9
Mov34/MPN/PAD-1 family protein.
    
 0.778
A0A1Y2GNW2
E2_bind domain-containing protein.
    
 0.757
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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