STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1Y2GKT9Restriction endonuclease type II-like protein. (261 aa)    
Predicted Functional Partners:
A0A1Y2GAL2
DNA repair protein.
   
 0.999
A0A1Y2GK04
Uncharacterized protein.
   
 0.999
A0A1Y2GEV7
WD-repeat region-domain-containing protein.
    
 0.978
A0A1Y2GNJ2
XPA protein C-terminus-domain-containing protein.
    
 0.977
A0A1Y2GPN6
ERCC4 domain-containing protein.
   
 0.968
A0A1Y2GT68
Nuclear protein localization protein 4.
    
 0.964
A0A1Y2H4F2
AA_TRNA_LIGASE_II domain-containing protein.
   
 0.958
A0A1Y2G898
Uncharacterized protein.
   
 0.920
A0A1Y2G9X2
Uncharacterized protein.
    
 0.918
A0A1Y2GUL3
Nuclear transport factor 2.
   
 0.913
Your Current Organism:
Lobosporangium transversale
NCBI taxonomy Id: 64571
Other names: ATCC 16960, CBS 357.67, Echinosporangium transversale, IMI 130776ii, L. transversale, NRRL 3116
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